IL_6MTE_050
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_050 not in the Motif Atlas
- Geometric match to IL_7A0S_005
- Geometric discrepancy: 0.2084
- The information below is about IL_7A0S_005
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 48
Unit IDs
6MTE|1|5|C|1474
6MTE|1|5|G|1475
6MTE|1|5|C|1476
*
6MTE|1|5|G|1489
6MTE|1|5|G|1490
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain L
- eL13
- Chain a
- uL15
- Chain b
- eL29
- Chain o
- eL42
Coloring options: