IL_6MTE_051

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

6MTE|1|5|A|1650, 6MTE|1|5|G|1654

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|C|1520
6MTE|1|5|C|1521
6MTE|1|5|OMG|1522
6MTE|1|5|A|1523
6MTE|1|5|A2M|1524
6MTE|1|5|A|1525
6MTE|1|5|G|1526
*
6MTE|1|5|C|1648
6MTE|1|5|U|1649
6MTE|1|5|A|1650
6MTE|1|5|G|1651
6MTE|1|5|U|1652
6MTE|1|5|A|1653
6MTE|1|5|G|1654
6MTE|1|5|C|1655
6MTE|1|5|U|1656
6MTE|1|5|G|1657

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain L

eL13

Chain N

eL15

Chain a

uL15

Chain j

eL37