IL_6MTE_060
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 6MTE|1|5|G|1724
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_060 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.115
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
6MTE|1|5|A|1723
6MTE|1|5|G|1724
6MTE|1|5|U|1725
*
6MTE|1|5|A|1838
6MTE|1|5|U|1839
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain F
- uL30
- Chain Q
- eL18
- Chain T
- eL21
- Chain b
- eL29
Coloring options: