IL_6MTE_074
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6MTE|1|5|C|1921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_074 not in the Motif Atlas
- Homologous match to IL_8GLP_078
- Geometric discrepancy: 0.1497
- The information below is about IL_8GLP_078
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 72
Unit IDs
6MTE|1|5|C|1920
6MTE|1|5|C|1921
6MTE|1|5|G|1922
*
6MTE|1|5|C|2062
6MTE|1|5|G|2063
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain F
- uL30
- Chain M
- eL14
- Chain O
- uL13
- Chain S
- eL20
- Chain f
- eL33
Coloring options: