IL_6MTE_132

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGC(PSU)UGUG*UUUUUGA(PSU)CC

Length

18 nucleotides

Bulged bases

6MTE|1|5|U|4437

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|G|4400
6MTE|1|5|G|4401
6MTE|1|5|C|4402
6MTE|1|5|PSU|4403
6MTE|1|5|U|4404
6MTE|1|5|G|4405
6MTE|1|5|U|4406
6MTE|1|5|G|4407
*
6MTE|1|5|U|4435
6MTE|1|5|U|4436
6MTE|1|5|U|4437
6MTE|1|5|U|4438
6MTE|1|5|U|4439
6MTE|1|5|G|4440
6MTE|1|5|A|4441
6MTE|1|5|PSU|4442
6MTE|1|5|C|4443
6MTE|1|5|C|4444

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain I

uL16

Chain b

eL29