IL_6MTE_152

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGGAGC*GAACCUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|C|4739
6MTE|1|5|G|4740
6MTE|1|5|G|4743
6MTE|1|5|A|4744
6MTE|1|5|G|4745
6MTE|1|5|C|4746
*
6MTE|1|5|G|4954
6MTE|1|5|A|4955
6MTE|1|5|A|4956
6MTE|1|5|C|4957
6MTE|1|5|C|4958
6MTE|1|5|U|4959
6MTE|1|5|G|4960

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA