IL_6MTE_184

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

U(OMU)CC(PSU)U(OMU)G*CAUUCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|9|U|115
6MTE|1|9|OMU|116
6MTE|1|9|C|117
6MTE|1|9|C|118
6MTE|1|9|PSU|119
6MTE|1|9|U|120
6MTE|1|9|OMU|121
6MTE|1|9|G|122
*
6MTE|1|9|C|342
6MTE|1|9|A|343
6MTE|1|9|U|344
6MTE|1|9|U|345
6MTE|1|9|C|346
6MTE|1|9|G|347
6MTE|1|9|A|348

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

eS4

Chain II

eS8

Chain LL

uS17