IL_6MTE_205
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGGGCAAGUC*GCU
- Length
- 13 nucleotides
- Bulged bases
- 6MTE|1|9|U|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_205 not in the Motif Atlas
- Geometric match to IL_4V88_470
- Geometric discrepancy: 0.2357
- The information below is about IL_4V88_470
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6MTE|1|9|A|599
6MTE|1|9|G|600
6MTE|1|9|G|601
6MTE|1|9|G|602
6MTE|1|9|C|603
6MTE|1|9|A|604
6MTE|1|9|A|605
6MTE|1|9|G|606
6MTE|1|9|U|607
6MTE|1|9|C|608
*
6MTE|1|9|G|635
6MTE|1|9|C|636
6MTE|1|9|U|637
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain CC
- uS5
- Chain DD
- uS3
- Chain JJ
- uS4
- Chain ee
- eS30
- Chain w
- SERBP1
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