IL_6MTE_257
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CG(OMC)U*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_257 not in the Motif Atlas
- Homologous match to IL_8C3A_473
- Geometric discrepancy: 0.4469
- The information below is about IL_8C3A_473
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6MTE|1|9|C|1708
6MTE|1|9|G|1709
6MTE|1|9|OMC|1710
6MTE|1|9|U|1711
*
6MTE|1|9|A|1822
6MTE|1|9|A|1823
6MTE|1|9|A|1824
6MTE|1|9|A|1825
6MTE|1|9|G|1826
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain XX
- uS12
- Chain n
- eL41
- Chain v
- eEF2
Coloring options: