IL_6MTE_304

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAAAAA(5MU)UA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|9|G|807
6MTE|1|9|A|808
6MTE|1|9|A|809
6MTE|1|9|A|810
6MTE|1|9|A|811
6MTE|1|9|A|812
6MTE|1|9|A|813
6MTE|1|9|5MU|814
6MTE|1|9|U|815
6MTE|1|9|A|816
*
6MTE|1|9|U|848
6MTE|1|9|A|849
6MTE|1|9|C|850
6MTE|1|9|C|851
6MTE|1|9|G|852
6MTE|1|9|C|853
6MTE|1|9|A|854
6MTE|1|9|G|855
6MTE|1|9|C|856

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

eS4

Chain JJ

uS4

Chain LL

uS17

Chain WW

uS8