IL_6N7P_008

3D structure

PDB id

6N7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

S. cerevisiae spliceosomal E complex (UBC4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAC*GGGU

Length

7 nucleotides

Bulged bases

6N7P|1|R|G|541

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N7P|1|R|G|170
6N7P|1|R|A|171
6N7P|1|R|C|172
*
6N7P|1|R|G|539
6N7P|1|R|G|540
6N7P|1|R|G|541
6N7P|1|R|U|542

Current chains

Chain R

U1 snRNA

Nearby chains

Chain B

U1 small nuclear ribonucleoprotein C

Chain K

Small nuclear ribonucleoprotein-associated protein B

Chain N

Small nuclear ribonucleoprotein Sm D3

Chain r

UBC4 pre-mRNA