IL_6N7P_025

3D structure

PDB id

6N7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

S. cerevisiae spliceosomal E complex (UBC4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAAU*AUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N7P|1|R|A|286
6N7P|1|R|A|287
6N7P|1|R|A|288
6N7P|1|R|U|289
*
6N7P|1|R|A|294
6N7P|1|R|U|295
6N7P|1|R|U|296

Current chains

Chain R

U1 snRNA

Nearby chains

Chain A

U1 small nuclear ribonucleoprotein 70 kDa homolog

Chain B

U1 small nuclear ribonucleoprotein C

Chain K

Small nuclear ribonucleoprotein-associated protein B

Chain r

UBC4 pre-mRNA