3D structure

PDB id
6N7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Saccharomyces cerevisiae spliceosomal E complex (ACT1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UUAU*AAGUCAUUG
Length
13 nucleotides
Bulged bases
6N7R|1|R|U|118
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6N7R|1|R|U|84
6N7R|1|R|U|85
6N7R|1|R|A|86
6N7R|1|R|U|87
*
6N7R|1|R|A|111
6N7R|1|R|A|112
6N7R|1|R|G|113
6N7R|1|R|U|114
6N7R|1|R|C|115
6N7R|1|R|A|116
6N7R|1|R|U|117
6N7R|1|R|U|118
6N7R|1|R|G|119

Current chains

Chain R
U1 snRNA

Nearby chains

Chain A
U1 small nuclear ribonucleoprotein 70 kDa homolog
Chain D
U1 small nuclear ribonucleoprotein component PRP42
Chain G
56 kDa U1 small nuclear ribonucleoprotein component
Chain H
U1 small nuclear ribonucleoprotein component SNU71,U1 small nuclear ribonucleoprotein component SNU71,Snu71
Chain N
Small nuclear ribonucleoprotein Sm D3
Chain Q
Small nuclear ribonucleoprotein G

Coloring options:

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