IL_6N8K_144
3D structure
- PDB id
- 6N8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGGGUGUAGAAUAAGUGGGAGCU*GCGCCAGUGAAAUACCACUACCUU
- Length
- 48 nucleotides
- Bulged bases
- 6N8K|1|1|U|2453, 6N8K|1|1|A|2458, 6N8K|1|1|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8K|1|1|G|2448
6N8K|1|1|A|2449
6N8K|1|1|G|2450
6N8K|1|1|G|2451
6N8K|1|1|G|2452
6N8K|1|1|U|2453
6N8K|1|1|G|2454
6N8K|1|1|U|2455
6N8K|1|1|A|2456
6N8K|1|1|G|2457
6N8K|1|1|A|2458
6N8K|1|1|A|2459
6N8K|1|1|U|2460
6N8K|1|1|A|2461
6N8K|1|1|A|2462
6N8K|1|1|G|2463
6N8K|1|1|U|2464
6N8K|1|1|G|2465
6N8K|1|1|G|2466
6N8K|1|1|G|2467
6N8K|1|1|A|2468
6N8K|1|1|G|2469
6N8K|1|1|C|2470
6N8K|1|1|U|2471
*
6N8K|1|1|G|2475
6N8K|1|1|C|2476
6N8K|1|1|G|2477
6N8K|1|1|C|2478
6N8K|1|1|C|2479
6N8K|1|1|A|2480
6N8K|1|1|G|2481
6N8K|1|1|U|2482
6N8K|1|1|G|2483
6N8K|1|1|A|2484
6N8K|1|1|A|2485
6N8K|1|1|A|2486
6N8K|1|1|U|2487
6N8K|1|1|A|2488
6N8K|1|1|C|2489
6N8K|1|1|C|2490
6N8K|1|1|A|2491
6N8K|1|1|C|2492
6N8K|1|1|U|2493
6N8K|1|1|A|2494
6N8K|1|1|C|2495
6N8K|1|1|C|2496
6N8K|1|1|U|2497
6N8K|1|1|U|2498
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain s
- Ribosomal Protein uL1
- Chain v
- 60S ribosomal export protein NMD3
Coloring options: