IL_6N8N_016
3D structure
- PDB id
- 6N8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAGACGGC*GCAUAAUG
- Length
- 16 nucleotides
- Bulged bases
- 6N8N|1|A|G|494
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8N|1|A|C|435
6N8N|1|A|A|436
6N8N|1|A|G|437
6N8N|1|A|A|438
6N8N|1|A|C|439
6N8N|1|A|G|494
6N8N|1|A|G|495
6N8N|1|A|C|496
*
6N8N|1|A|G|617
6N8N|1|A|C|618
6N8N|1|A|A|619
6N8N|1|A|U|620
6N8N|1|A|A|621
6N8N|1|A|A|622
6N8N|1|A|U|623
6N8N|1|A|G|624
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain H
- 60S ribosomal protein L6-A
- Chain c
- 60S ribosomal protein L17-A
- Chain r
- 60S ribosomal protein L32
- Chain s
- 60S ribosomal protein L33-A
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