IL_6N8N_088

3D structure

PDB id

6N8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGGGUGUAGAAUAAG*CUACCUU

Length

23 nucleotides

Bulged bases

6N8N|1|A|U|2453, 6N8N|1|A|A|2458, 6N8N|1|A|U|2460

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8N|1|A|G|2448
6N8N|1|A|A|2449
6N8N|1|A|G|2450
6N8N|1|A|G|2451
6N8N|1|A|G|2452
6N8N|1|A|U|2453
6N8N|1|A|G|2454
6N8N|1|A|U|2455
6N8N|1|A|A|2456
6N8N|1|A|G|2457
6N8N|1|A|A|2458
6N8N|1|A|A|2459
6N8N|1|A|U|2460
6N8N|1|A|A|2461
6N8N|1|A|A|2462
6N8N|1|A|G|2463
*
6N8N|1|A|C|2492
6N8N|1|A|U|2493
6N8N|1|A|A|2494
6N8N|1|A|C|2495
6N8N|1|A|C|2496
6N8N|1|A|U|2497
6N8N|1|A|U|2498

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain S

Ribosomal Protein uL1