IL_6N8N_141
3D structure
- PDB id
- 6N8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AUC*GAUU
- Length
- 7 nucleotides
- Bulged bases
- 6N8N|1|A|U|776
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N8N_141 not in the Motif Atlas
- Geometric match to IL_4V88_507
- Geometric discrepancy: 0.2691
- The information below is about IL_4V88_507
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6N8N|1|A|A|755
6N8N|1|A|U|756
6N8N|1|A|C|757
*
6N8N|1|A|G|774
6N8N|1|A|A|775
6N8N|1|A|U|776
6N8N|1|A|U|777
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain Q
- 60S ribosomal protein L42-A
- Chain d
- 60S ribosomal protein L18-A
- Chain o
- 60S ribosomal protein L29
Coloring options: