IL_6N8N_152

3D structure

PDB id

6N8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUAUCAC*GUCUUAUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8N|1|A|U|1702
6N8N|1|A|U|1703
6N8N|1|A|A|1704
6N8N|1|A|U|1705
6N8N|1|A|C|1706
6N8N|1|A|A|1707
6N8N|1|A|C|1708
*
6N8N|1|A|G|1736
6N8N|1|A|U|1737
6N8N|1|A|C|1738
6N8N|1|A|U|1739
6N8N|1|A|U|1740
6N8N|1|A|A|1741
6N8N|1|A|U|1742
6N8N|1|A|G|1743

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain m

60S ribosomal protein L27-A

Chain t

60S ribosomal protein L34-A