IL_6N8O_105

3D structure

PDB id

6N8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCAAGC*GCGACA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8O|1|A|U|2835
6N8O|1|A|C|2836
6N8O|1|A|A|2837
6N8O|1|A|A|2838
6N8O|1|A|G|2839
6N8O|1|A|C|2840
*
6N8O|1|A|G|2848
6N8O|1|A|C|2849
6N8O|1|A|G|2850
6N8O|1|A|A|2851
6N8O|1|A|C|2852
6N8O|1|A|A|2853

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain Z

60S ribosomal protein L10

Chain z

Ubiquitin-60S ribosomal protein L40