IL_6N8O_112
3D structure
- PDB id
- 6N8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 6N8O|1|A|A|2971
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N8O_112 not in the Motif Atlas
- Homologous match to IL_5TBW_113
- Geometric discrepancy: 0.2801
- The information below is about IL_5TBW_113
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.8
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 125
Unit IDs
6N8O|1|A|C|2960
6N8O|1|A|G|2961
*
6N8O|1|A|C|2970
6N8O|1|A|A|2971
6N8O|1|A|G|2972
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain D
- 60S ribosomal protein L2-A
- Chain V
- 60S ribosomal export protein NMD3
Coloring options: