IL_6N8O_133

3D structure

PDB id

6N8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6N8O|1|A|U|3341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8O|1|A|G|3340
6N8O|1|A|U|3341
6N8O|1|A|A|3342
6N8O|1|A|G|3343
6N8O|1|A|A|3344
6N8O|1|A|G|3345
*
6N8O|1|A|C|3360
6N8O|1|A|G|3361
6N8O|1|A|A|3362
6N8O|1|A|U|3363
6N8O|1|A|C|3364

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain e

60S ribosomal protein L19-A

Chain j

60S ribosomal protein L24-A