IL_6N9E_042

3D structure

PDB id

6N9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUGGC*GCCAUC

Length

11 nucleotides

Bulged bases

6N9E|1|1A|U|1124

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9E|1|1A|G|1105
6N9E|1|1A|U|1106
6N9E|1|1A|G|1108
6N9E|1|1A|G|1109
6N9E|1|1A|C|1110
*
6N9E|1|1A|G|1120
6N9E|1|1A|C|1121
6N9E|1|1A|C|1122
6N9E|1|1A|A|1123
6N9E|1|1A|U|1124
6N9E|1|1A|C|1125

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains