IL_6N9F_066
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 6N9F|1|1A|G|1746
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N9F_066 not in the Motif Atlas
- Homologous match to IL_7RQB_068
- Geometric discrepancy: 0.0862
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6N9F|1|1A|C|1733
6N9F|1|1A|G|1734
6N9F|1|1A|U|1735
6N9F|1|1A|A|1736
6N9F|1|1A|A|1737
6N9F|1|1A|C|1738
*
6N9F|1|1A|G|1743
6N9F|1|1A|G|1744
6N9F|1|1A|A|1745
6N9F|1|1A|G|1746
6N9F|1|1A|A|1747
6N9F|1|1A|A|1748
6N9F|1|1A|G|1749
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S Ribosomal Protein L2
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: