IL_6N9F_253

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|2A|G|2124
6N9F|1|2A|G|2125
6N9F|1|2A|A|2126
6N9F|1|2A|G|2127
6N9F|1|2A|C|2128
*
6N9F|1|2A|G|2160
6N9F|1|2A|C|2161
6N9F|1|2A|G|2162
6N9F|1|2A|C|2163
6N9F|1|2A|C|2164
6N9F|1|2A|G|2165
6N9F|1|2A|G|2166
6N9F|1|2A|U|2167
6N9F|1|2A|G|2168
6N9F|1|2A|A|2169
6N9F|1|2A|A|2170
6N9F|1|2A|A|2171
6N9F|1|2A|U|2172
6N9F|1|2A|A|2173
6N9F|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains