3D structure

PDB id
6N9F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
GGAAC*GGUGCCCCGCGAGGGGAGCC
Length
25 nucleotides
Bulged bases
6N9F|1|2a|C|1030|||B
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6N9F|1|2a|G|1002
6N9F|1|2a|G|1003
6N9F|1|2a|A|1004
6N9F|1|2a|A|1005
6N9F|1|2a|C|1006
*
6N9F|1|2a|G|1023
6N9F|1|2a|G|1024
6N9F|1|2a|U|1025
6N9F|1|2a|G|1026
6N9F|1|2a|C|1027
6N9F|1|2a|C|1028
6N9F|1|2a|C|1029
6N9F|1|2a|C|1030
6N9F|1|2a|G|1030|||A
6N9F|1|2a|C|1030|||B
6N9F|1|2a|G|1030|||C
6N9F|1|2a|A|1030|||D
6N9F|1|2a|G|1031
6N9F|1|2a|G|1032
6N9F|1|2a|G|1033
6N9F|1|2a|G|1034
6N9F|1|2a|A|1035
6N9F|1|2a|G|1036
6N9F|1|2a|C|1037
6N9F|1|2a|C|1038

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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