IL_6N9F_390

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GCUAGGG*UACCAAAC

Length

15 nucleotides

Bulged bases

6N9F|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|2A|G|875
6N9F|1|2A|C|876
6N9F|1|2A|U|877
6N9F|1|2A|A|878
6N9F|1|2A|G|879
6N9F|1|2A|G|880
6N9F|1|2A|G|881
*
6N9F|1|2A|U|895
6N9F|1|2A|A|896
6N9F|1|2A|C|897
6N9F|1|2A|C|898
6N9F|1|2A|A|899
6N9F|1|2A|A|900
6N9F|1|2A|A|901
6N9F|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S Ribosomal Protein L16

Chain 2Z

50S ribosomal protein L25