3D structure

PDB id
6ND5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
GGGACG*CGGUACC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ND5|1|2a|G|445
6ND5|1|2a|G|446
6ND5|1|2a|G|447
6ND5|1|2a|A|448
6ND5|1|2a|C|449
6ND5|1|2a|G|450
*
6ND5|1|2a|C|483
6ND5|1|2a|G|484
6ND5|1|2a|G|485
6ND5|1|2a|U|486
6ND5|1|2a|A|487
6ND5|1|2a|C|488
6ND5|1|2a|C|489

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

Chain 2d
30S ribosomal protein S4
Chain 2p
30S ribosomal protein S16

Coloring options:

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