IL_6ND5_353
3D structure
- PDB id
- 6ND5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGCUAGGG*UACCAAACC
- Length
- 17 nucleotides
- Bulged bases
- 6ND5|1|2A|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ND5|1|2A|G|874
6ND5|1|2A|G|875
6ND5|1|2A|C|876
6ND5|1|2A|U|877
6ND5|1|2A|A|878
6ND5|1|2A|G|879
6ND5|1|2A|G|880
6ND5|1|2A|G|881
*
6ND5|1|2A|U|895
6ND5|1|2A|A|896
6ND5|1|2A|C|897
6ND5|1|2A|C|898
6ND5|1|2A|A|899
6ND5|1|2A|A|900
6ND5|1|2A|A|901
6ND5|1|2A|C|902
6ND5|1|2A|C|903
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2Z
- 50S ribosomal protein L25
- Chain 2w
- Transfer RNA; tRNA
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