IL_6ND6_254

3D structure

PDB id

6ND6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

CUGUGAACCC*GGGGGAG

Length

17 nucleotides

Bulged bases

6ND6|1|2A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ND6|1|2A|C|2129
6ND6|1|2A|U|2130
6ND6|1|2A|G|2131
6ND6|1|2A|U|2132
6ND6|1|2A|G|2133
6ND6|1|2A|A|2134
6ND6|1|2A|A|2135
6ND6|1|2A|C|2136
6ND6|1|2A|C|2137
6ND6|1|2A|C|2138
*
6ND6|1|2A|G|2153
6ND6|1|2A|G|2154
6ND6|1|2A|G|2155
6ND6|1|2A|G|2156
6ND6|1|2A|G|2157
6ND6|1|2A|A|2158
6ND6|1|2A|G|2159

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains