IL_6NDK_026

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GUGAAAGAC*GGGGAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|QA|G|604
6NDK|1|QA|U|605
6NDK|1|QA|G|606
6NDK|1|QA|A|607
6NDK|1|QA|A|608
6NDK|1|QA|A|609
6NDK|1|QA|G|610
6NDK|1|QA|A|611
6NDK|1|QA|C|612
*
6NDK|1|QA|G|628
6NDK|1|QA|G|629
6NDK|1|QA|G|630
6NDK|1|QA|G|631
6NDK|1|QA|A|632
6NDK|1|QA|G|633
6NDK|1|QA|C|634

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4

Chain QH

30S ribosomal protein S8

Chain QP

30S ribosomal protein S16

Chain QQ

30S ribosomal protein S17