IL_6NDK_029

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGAGAG*UGGUC

Length

11 nucleotides

Bulged bases

6NDK|1|QA|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|QA|G|661
6NDK|1|QA|G|662
6NDK|1|QA|A|663
6NDK|1|QA|G|664
6NDK|1|QA|A|665
6NDK|1|QA|G|666
*
6NDK|1|QA|U|740
6NDK|1|QA|G|741
6NDK|1|QA|G|742
6NDK|1|QA|U|743
6NDK|1|QA|C|744

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QF

30S ribosomal protein S6

Chain QO

30S ribosomal protein S15

Chain QR

30S ribosomal protein S18