IL_6NDK_044
3D structure
- PDB id
- 6NDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ASLSufA6 A37.5 bound to the 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NDK_044 not in the Motif Atlas
- Geometric match to IL_4P43_001
- Geometric discrepancy: 0.1315
- The information below is about IL_4P43_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6NDK|1|QA|G|1061
6NDK|1|QA|U|1062
6NDK|1|QA|C|1063
*
6NDK|1|QA|G|1193
6NDK|1|QA|U|1194
6NDK|1|QA|C|1195
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QC
- 30S ribosomal protein S3
- Chain QE
- 30S ribosomal protein S5
- Chain QJ
- 30S ribosomal protein S10
- Chain QN
- 30S ribosomal protein S14 type Z
- Chain QX
- mRNA
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