IL_6NDK_271

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGAAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6NDK|1|YA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|YA|C|1043
6NDK|1|YA|G|1044
6NDK|1|YA|A|1045
6NDK|1|YA|A|1046
6NDK|1|YA|G|1047
6NDK|1|YA|A|1048
6NDK|1|YA|C|1049
6NDK|1|YA|A|1050
6NDK|1|YA|G|1051
6NDK|1|YA|C|1052
*
6NDK|1|YA|G|1107
6NDK|1|YA|U|1108
6NDK|1|YA|C|1109
6NDK|1|YA|G|1110
6NDK|1|YA|A|1111
6NDK|1|YA|G|1112

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6