IL_6NDK_364

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGUAAGC*GUUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|RA|U|2847
6NDK|1|RA|G|2848
6NDK|1|RA|U|2849
6NDK|1|RA|A|2850
6NDK|1|RA|A|2851
6NDK|1|RA|G|2852
6NDK|1|RA|C|2853
*
6NDK|1|RA|G|2864
6NDK|1|RA|U|2865
6NDK|1|RA|U|2866
6NDK|1|RA|G|2867
6NDK|1|RA|A|2868
6NDK|1|RA|G|2869

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RR

50S ribosomal protein L17

Chain RT

50S ribosomal protein L19