IL_6NDK_366
3D structure
- PDB id
- 6NDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ASLSufA6 A37.5 bound to the 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- ACCC*GGAAGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NDK_366 not in the Motif Atlas
- Homologous match to IL_7A0S_104
- Geometric discrepancy: 0.5675
- The information below is about IL_7A0S_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.4
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6NDK|1|RB|A|29
6NDK|1|RB|C|30
6NDK|1|RB|C|31
6NDK|1|RB|C|32
*
6NDK|1|RB|G|50
6NDK|1|RB|G|51
6NDK|1|RB|A|52
6NDK|1|RB|A|53
6NDK|1|RB|G|54
6NDK|1|RB|U|55
Current chains
- Chain RB
- 5S rRNA
Nearby chains
- Chain RG
- 50S ribosomal protein L5
- Chain RS
- 50S ribosomal protein L18
Coloring options: