IL_6NDK_375

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGAGC*GUGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|XA|G|1416
6NDK|1|XA|G|1417
6NDK|1|XA|A|1418
6NDK|1|XA|G|1419
6NDK|1|XA|C|1420
*
6NDK|1|XA|G|1480
6NDK|1|XA|U|1481
6NDK|1|XA|G|1482
6NDK|1|XA|A|1483
6NDK|1|XA|C|1484

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain YA

Large subunit ribosomal RNA; LSU rRNA

Chain YO

50S ribosomal protein L14