IL_6NDK_381

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGAAGC*GUGACAAC

Length

14 nucleotides

Bulged bases

6NDK|1|YA|C|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|YA|G|1526
6NDK|1|YA|G|1527
6NDK|1|YA|A|1528|||A
6NDK|1|YA|A|1528|||B
6NDK|1|YA|G|1529
6NDK|1|YA|C|1530
*
6NDK|1|YA|G|1539
6NDK|1|YA|U|1540
6NDK|1|YA|G|1541
6NDK|1|YA|A|1542
6NDK|1|YA|C|1543
6NDK|1|YA|A|1544
6NDK|1|YA|A|1545
6NDK|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YR

50S ribosomal protein L17