3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGGUAGAAUUCCAGGAAUACCGGUGGC*GCGGCCC
Length
34 nucleotides
Bulged bases
6NQB|1|A|U|723
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|G|669
6NQB|1|A|G|670
6NQB|1|A|G|671
6NQB|1|A|U|672
6NQB|1|A|A|673
6NQB|1|A|G|674
6NQB|1|A|A|675
6NQB|1|A|A|676
6NQB|1|A|U|677
6NQB|1|A|U|678
6NQB|1|A|C|679
6NQB|1|A|C|680
6NQB|1|A|A|712
6NQB|1|A|G|713
6NQB|1|A|G|714
6NQB|1|A|A|715
6NQB|1|A|A|716
6NQB|1|A|U|717
6NQB|1|A|A|718
6NQB|1|A|C|719
6NQB|1|A|C|720
6NQB|1|A|G|721
6NQB|1|A|G|722
6NQB|1|A|U|723
6NQB|1|A|G|724
6NQB|1|A|G|725
6NQB|1|A|C|726
*
6NQB|1|A|G|731
6NQB|1|A|C|732
6NQB|1|A|G|733
6NQB|1|A|G|734
6NQB|1|A|C|735
6NQB|1|A|C|736
6NQB|1|A|C|737

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain F
30S ribosomal protein S6
Chain O
30S ribosomal protein S15
Chain R
30S ribosomal protein S18

Coloring options:

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