3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GACUUG*CGGAGCUAACGCGUUAAGUC
Length
26 nucleotides
Bulged bases
6NQB|1|A|U|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|G|824
6NQB|1|A|A|825
6NQB|1|A|C|826
6NQB|1|A|U|827
6NQB|1|A|U|828
6NQB|1|A|G|829
*
6NQB|1|A|C|857
6NQB|1|A|G|858
6NQB|1|A|G|859
6NQB|1|A|A|860
6NQB|1|A|G|861
6NQB|1|A|C|862
6NQB|1|A|U|863
6NQB|1|A|A|864
6NQB|1|A|A|865
6NQB|1|A|C|866
6NQB|1|A|G|867
6NQB|1|A|C|868
6NQB|1|A|G|869
6NQB|1|A|U|870
6NQB|1|A|U|871
6NQB|1|A|A|872
6NQB|1|A|A|873
6NQB|1|A|G|874
6NQB|1|A|U|875
6NQB|1|A|C|876

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain B
30S ribosomal protein S2
Chain E
30S ribosomal protein S5
Chain H
30S ribosomal protein S8

Coloring options:

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