3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGGGGC*GCCUU
Length
11 nucleotides
Bulged bases
6NQB|1|A|G|926
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|G|925
6NQB|1|A|G|926
6NQB|1|A|G|927
6NQB|1|A|G|928
6NQB|1|A|G|929
6NQB|1|A|C|930
*
6NQB|1|A|G|1387
6NQB|1|A|C|1388
6NQB|1|A|C|1389
6NQB|1|A|U|1390
6NQB|1|A|U|1391

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain E
30S ribosomal protein S5

Coloring options:

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