IL_6NSH_142

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

6NSH|1|RA|G|2166, 6NSH|1|RA|U|2167, 6NSH|1|RA|A|2169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|RA|G|2124
6NSH|1|RA|G|2125
6NSH|1|RA|A|2126
6NSH|1|RA|G|2127
*
6NSH|1|RA|C|2161
6NSH|1|RA|G|2162
6NSH|1|RA|C|2163
6NSH|1|RA|C|2164
6NSH|1|RA|G|2165
6NSH|1|RA|G|2166
6NSH|1|RA|U|2167
6NSH|1|RA|G|2168
6NSH|1|RA|A|2169
6NSH|1|RA|A|2170
6NSH|1|RA|A|2171
6NSH|1|RA|U|2172
6NSH|1|RA|A|2173
6NSH|1|RA|C|2174

Current chains

Chain RA

23S rRNA

Nearby chains