IL_6NSH_217

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

AGUUGC*GGCACUCU

Length

14 nucleotides

Bulged bases

6NSH|1|XA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|XA|A|1123
6NSH|1|XA|G|1124
6NSH|1|XA|U|1125
6NSH|1|XA|U|1126
6NSH|1|XA|G|1127
6NSH|1|XA|C|1128
*
6NSH|1|XA|G|1143
6NSH|1|XA|G|1144
6NSH|1|XA|C|1145
6NSH|1|XA|A|1146
6NSH|1|XA|C|1147
6NSH|1|XA|U|1148
6NSH|1|XA|C|1149
6NSH|1|XA|U|1150

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9

Chain XJ

30S ribosomal protein S10