IL_6NSH_230
3D structure
- PDB id
- 6NSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NSH_230 not in the Motif Atlas
- Geometric match to IL_4LFB_062
- Geometric discrepancy: 0.1077
- The information below is about IL_4LFB_062
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.6
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6NSH|1|XA|C|1431
6NSH|1|XA|G|1432
6NSH|1|XA|A|1433
6NSH|1|XA|A|1434
6NSH|1|XA|G|1435
*
6NSH|1|XA|C|1466
6NSH|1|XA|G|1467
6NSH|1|XA|A|1468
6NSH|1|XA|G|1469
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XT
- 30S ribosomal protein S20
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YT
- 50S ribosomal protein L19
Coloring options: