IL_6NSH_357
3D structure
- PDB id
- 6NSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUAC
- Length
- 33 nucleotides
- Bulged bases
- 6NSH|1|YA|A|2126, 6NSH|1|YA|U|2132, 6NSH|1|YA|U|2167, 6NSH|1|YA|A|2171, 6NSH|1|YA|U|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NSH|1|YA|G|2124
6NSH|1|YA|G|2125
6NSH|1|YA|A|2126
6NSH|1|YA|G|2127
6NSH|1|YA|C|2128
6NSH|1|YA|C|2129
6NSH|1|YA|U|2130
6NSH|1|YA|G|2131
6NSH|1|YA|U|2132
6NSH|1|YA|G|2133
6NSH|1|YA|A|2134
6NSH|1|YA|A|2135
6NSH|1|YA|C|2136
*
6NSH|1|YA|G|2155
6NSH|1|YA|G|2156
6NSH|1|YA|G|2157
6NSH|1|YA|A|2158
6NSH|1|YA|G|2159
6NSH|1|YA|G|2160
6NSH|1|YA|C|2161
6NSH|1|YA|G|2162
6NSH|1|YA|C|2163
6NSH|1|YA|C|2164
6NSH|1|YA|G|2165
6NSH|1|YA|G|2166
6NSH|1|YA|U|2167
6NSH|1|YA|G|2168
6NSH|1|YA|A|2169
6NSH|1|YA|A|2170
6NSH|1|YA|A|2171
6NSH|1|YA|U|2172
6NSH|1|YA|A|2173
6NSH|1|YA|C|2174
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: