IL_6NTA_140

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NTA_140 not in the Motif Atlas

Geometric match to IL_6JDV_002

Geometric discrepancy: 0.2954

The information below is about IL_6JDV_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6NTA|1|RA|C|2107
6NTA|1|RA|C|2108
6NTA|1|RA|U|2109
6NTA|1|RA|G|2110
*
6NTA|1|RA|C|2179
6NTA|1|RA|U|2180
6NTA|1|RA|G|2181
6NTA|1|RA|G|2182

Current chains

Chain RA

23S rRNA

Nearby chains