IL_6NTA_316

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCCUGCGUAGGAUAGGUG*CACCCUGGC

Length

27 nucleotides

Bulged bases

6NTA|1|YA|C|2111, 6NTA|1|YA|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NTA|1|YA|G|2106
6NTA|1|YA|C|2107
6NTA|1|YA|C|2108
6NTA|1|YA|U|2109
6NTA|1|YA|G|2110
6NTA|1|YA|C|2111
6NTA|1|YA|G|2112
6NTA|1|YA|U|2113
6NTA|1|YA|A|2114
6NTA|1|YA|G|2115
6NTA|1|YA|G|2116
6NTA|1|YA|A|2117
6NTA|1|YA|U|2118
6NTA|1|YA|A|2119
6NTA|1|YA|G|2120
6NTA|1|YA|G|2121
6NTA|1|YA|U|2122
6NTA|1|YA|G|2123
*
6NTA|1|YA|C|2175
6NTA|1|YA|A|2176
6NTA|1|YA|C|2177
6NTA|1|YA|C|2178
6NTA|1|YA|C|2179
6NTA|1|YA|U|2180
6NTA|1|YA|G|2181
6NTA|1|YA|G|2182
6NTA|1|YA|C|2183

Current chains

Chain YA

23S rRNA

Nearby chains