IL_6NTA_347

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

6NTA|1|QA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NTA_347 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.139

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

6NTA|1|QA|G|409
6NTA|1|QA|G|410
6NTA|1|QA|A|411
6NTA|1|QA|A|412
6NTA|1|QA|G|413
6NTA|1|QA|A|414
6NTA|1|QA|A|415
6NTA|1|QA|G|416
*
6NTA|1|QA|U|427
6NTA|1|QA|G|428
6NTA|1|QA|U|429
6NTA|1|QA|A|430
6NTA|1|QA|A|431
6NTA|1|QA|A|432
6NTA|1|QA|C|433

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QD

30S ribosomal protein S4