IL_6NTA_356

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

6NTA|1|RA|A|1938, 6NTA|1|RA|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NTA|1|RA|C|1934
6NTA|1|RA|G|1935
6NTA|1|RA|A|1936
6NTA|1|RA|A|1937
6NTA|1|RA|A|1938
6NTA|1|RA|U|1939
6NTA|1|RA|U|1940
6NTA|1|RA|C|1941
6NTA|1|RA|C|1942
6NTA|1|RA|U|1943
6NTA|1|RA|U|1944
6NTA|1|RA|G|1945
6NTA|1|RA|U|1946
*
6NTA|1|RA|A|1960
6NTA|1|RA|C|1961
6NTA|1|RA|C|1962
6NTA|1|RA|U|1963
6NTA|1|RA|G|1964

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RD

50S ribosomal protein L2