3D structure

PDB id
6NTA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified ASL proline bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GGUUG*CAUCC
Length
10 nucleotides
Bulged bases
6NTA|1|YA|U|1061, 6NTA|1|YA|A|1077
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NTA|1|YA|G|1058
6NTA|1|YA|G|1059
6NTA|1|YA|U|1060
6NTA|1|YA|U|1061
6NTA|1|YA|G|1062
*
6NTA|1|YA|C|1076
6NTA|1|YA|A|1077
6NTA|1|YA|U|1078
6NTA|1|YA|C|1079
6NTA|1|YA|C|1080

Current chains

Chain YA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3229 s