IL_6NWY_072

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NWY_072 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.1306

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

6NWY|1|RA|U|293
6NWY|1|RA|A|294
6NWY|1|RA|G|295
*
6NWY|1|RA|C|343
6NWY|1|RA|G|344
6NWY|1|RA|A|345
6NWY|1|RA|A|346
6NWY|1|RA|A|347

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RY

50S ribosomal protein L24